Decomike, keep your 5503.55. I'm still struggling with the 17-40L in terms of getting acceptable sharpness U/W, and one of the things I've thought of trying is the 5503.55 port.
The 5505.50 has the dome very close to the front element, to the point that I managed to scratch the inside when testing a diopter. May main concern though is dome port position vs nodal point/entrance pupil of lens. The problem as I see it is that entrance pupil at 17mm is not at the right position relative to the 5503.50 dome. The 5503.55 may be worse, but then again it may be just right.
Using Canon lenses underwater is still uncharted territory in many respects. i think the Ikelite port chart is based on the physical dimensions of the lens, but I don't think it involves optical calculations (Ike, correct me if I'm wrong on this). We've also theorised that with the smaller diameter Ikelite ports, the match may have to be more exact than with a large dome port.
At this stage for me, the 17-40L plus 5503.50 performs more like a $50 lens than a $800 one, in terms of wide angle, which is what I'm trying to use it for.
Craig, Canon wides aren't great on the 1Ds Mk1 or 2. Sigma 20/1.8 has marked sample variation. Zeiss 21mm is generally considered the best peformer, but isn't really suited to underwater use. 24/1.4L is an OK performer. I own the 24/2.8, which no one seems to bother testing on the 1Ds (never seen it done), but which I used to consider very sharp when shooting film. My next wide purchase will be the 24mm TS-E, but I don't see that listed on the Ikelite port chart